Solyc12g089010.3.1 (EMB3011, Solyc12g089010)

Aliases : EMB3011, Solyc12g089010

Description : RNA helicase (Prp16)

Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g089010.3.1

Target	Alias	Description	ECC score	Gene Family Method
Ala_g07016	No alias	RNA helicase *(Prp22) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g31083	No alias	RNA helicase *(Prp22) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g35974	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g01933	ESP3, EMB2733	RNA helicase *(Prp2) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g22606	EMB3011	RNA helicase *(Prp16) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g34333	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g15286	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	408	535
IPR007502	Helicase-assoc_dom	599	633
IPR018647	SLFN_3-like_DNA/RNA_helicase	218	324

External Links

No external refs found!