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  5. Solyc12g088670.2.1

Solyc12g088670.2.1 (RD21, RD21A, Solyc12g088670)


Aliases : RD21, RD21A, Solyc12g088670

Description : Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum (sp|p20721|cyspl_sollc : 644.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 356.0)


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088670.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00165270 XCP1,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00051p00208220 RD21, RD21A,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00215530 SAG12,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 OrthoFinder output from all 47 species
AMTR_s01332p00008900 SAG12,... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 OrthoFinder output from all 47 species
AT1G06260 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.04 OrthoFinder output from all 47 species
AT2G27420 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50260 No alias Cysteine proteinases superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g024466 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ala_g13907 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ala_g14988 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Als_g11954 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Als_g11955 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aob_g07150 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aop_g23157 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene71180.t1 Aspi01Gene71180 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030827 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.03G086100.1 Ceric.03G086100 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ceric.04G100700.1 RD21, RD21A,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cre05.g247851 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g35831 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dac_g36098 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dde_g21267 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020696001 SAG12 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Gb_12857 RD21, RD21A Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_17130 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 OrthoFinder output from all 47 species
Gb_17132 XCP1 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 OrthoFinder output from all 47 species
Gb_24406 No alias protease (Papain) 0.03 OrthoFinder output from all 47 species
Gb_31935 RD21, RD21A Prgrammed Cell Death cysteine protease (XCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g67980.1 LOC_Os01g67980 protease (Papain) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73980.1 XCP2, LOC_Os01g73980 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32230.1 SAG12, LOC_Os09g32230 Senescence-specific cysteine protease SAG12... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14900.4 LOC_Os11g14900 protease (Papain) 0.03 OrthoFinder output from all 47 species
MA_103463g0010 No alias Vignain OS=Vigna mungo (sp|p12412|cysep_vigmu : 408.0) &... 0.03 OrthoFinder output from all 47 species
MA_10429635g0010 XCP1 Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g03230.1 XCP1 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g07249 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Msp_g15927 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Msp_g38653 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Nbi_g22784 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g04414 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ore_g13848 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ppi_g13205 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017739 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g13062 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g26370 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Tin_g37188 No alias EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Tin_g40421 RD21, RD21A EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e006743_P002 Zm00001e006743 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Zm00001e028260_P001 XCP2, Zm00001e028260 Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029667_P001 XCP2, Zm00001e029667 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
Zm00001e036416_P001 SAG12, Zm00001e036416 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 OrthoFinder output from all 47 species
Zm00001e036418_P001 SAG12, Zm00001e036418 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e036419_P001 SAG12, Zm00001e036419 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e036420_P001 SAG12, Zm00001e036420 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e039782_P001 Zm00001e039782 Fruit bromelain OS=Ananas comosus (sp|o23791|brom1_anaco... 0.02 OrthoFinder output from all 47 species
Zm00001e041788_P001 Zm00001e041788 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 49 106
IPR000668 Peptidase_C1A_C 138 352
IPR000118 Granulin 387 433
No external refs found!