1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g088050.2.1

Solyc12g088050.2.1 (Solyc12g088050)


Aliases : Solyc12g088050

Description : no hits & (original description: none)


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088050.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Dcu_g13998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g44020.2 LOC_Os08g44020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc11g011300.2.1 Solyc11g011300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g07865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 358 420
IPR029411 RG-lyase_III 435 622
IPR010325 Rhamnogal_lyase 11 203
No external refs found!