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  5. Solyc12g057040.2.1

Solyc12g057040.2.1 (HY4, ATCRY1, BLU1,...)


Aliases : HY4, ATCRY1, BLU1, OOP2, CRY1, Solyc12g057040

Description : cryptochrome photoreceptor (CRY)


Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g057040.2.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00182380 HY4, ATCRY1,... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
GSVIVT01009033001 HY4, ATCRY1,... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
LOC_Os02g36380.1 HY4, ATCRY1,... cryptochrome photoreceptor (CRY) 0.03 OrthoFinder output from all 47 species
LOC_Os04g37920.1 HY4, ATCRY1,... cryptochrome photoreceptor (CRY) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 7 163
IPR005101 Cryptochr/Photolyase_FAD-bd 283 481
IPR020978 Cryptochrome_C 512 580
No external refs found!