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  5. Solyc12g056650.2.1

Solyc12g056650.2.1 (GI, FB, Solyc12g056650)


Aliases : GI, FB, Solyc12g056650

Description : GIGANTEA zeitlupe-mediated photoperception regulator protein


Gene families : OG0006226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056650.2.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Adi_g059918 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.02 OrthoFinder output from all 47 species
Aev_g03384 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.03 OrthoFinder output from all 47 species
Ala_g13188 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.03 OrthoFinder output from all 47 species
Dcu_g04976 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.02 OrthoFinder output from all 47 species
GSVIVT01001405001 GI, FB Protein GIGANTEA OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01001406001 GI, FB External stimuli response.light.UV-A/blue... 0.06 OrthoFinder output from all 47 species
LOC_Os01g08700.2 GI, FB, LOC_Os01g08700 GIGANTEA zeitlupe-mediated photoperception regulator protein 0.03 OrthoFinder output from all 47 species
Pir_g15045 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.02 OrthoFinder output from all 47 species
Sam_g29734 No alias regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.05 OrthoFinder output from all 47 species
Spa_g08263 GI, FB regulatory protein *(GIGANTEA) of zeitlupe-mediated... 0.02 OrthoFinder output from all 47 species
Zm00001e016671_P001 GI, FB, Zm00001e016671 GIGANTEA zeitlupe-mediated photoperception regulator protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004476 mannose-6-phosphate isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!