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  5. Solyc12g056400.3.1

Solyc12g056400.3.1 (Solyc12g056400)


Aliases : Solyc12g056400

Description : RING-H2-class E3 ligase


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056400.3.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene52652.t1 Aspi01Gene52652 E3 ubiquitin ligase *(RIE1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07044 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091600.4.1 Solyc01g091600 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Zm00001e007222_P001 Zm00001e007222 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 299 341
No external refs found!