Solyc12g055930.3.1 (UGE2, ATUGE2, Solyc12g055930)


Aliases : UGE2, ATUGE2, Solyc12g055930

Description : UDP-D-glucose 4-epimerase


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g055930.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g013727 ATUGE1, UGE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023902 No alias EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055990 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077054 UGE3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106654 No alias EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40162 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17232 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35618 No alias EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12017.t1 UGE2, ATUGE2,... EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44801.t1 UGE2, ATUGE2,... EC_5.1 racemase or epimerase & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene44802.t1 ATUGE1, UGE1,... EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0302.g063753 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: CDS=930-1343 0.03 OrthoFinder output from all 47 species
Ceric.21G032300.1 UGE2, ATUGE2,... EC_5.1 racemase or epimerase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15410 UGE5 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16034 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28825 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02322 UGE2, ATUGE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14854 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18946 UGE5 EC_5.1 racemase or epimerase & original description: none 0.07 OrthoFinder output from all 47 species
Len_g57619 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04833 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428611g0010 ATUGE1, UGE1 UDP-D-glucose 4-epimerase 0.04 OrthoFinder output from all 47 species
MA_28209g0010 MUR4, UXE1, HSR8 UDP-D-xylose 4-epimerase 0.03 OrthoFinder output from all 47 species
MA_5622761g0010 No alias Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Nbi_g02234 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11257 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26255 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44408 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13461 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14561 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_25130V3.1 REB1, UGE4,... NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g02935 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04366 UGE5 EC_5.1 racemase or epimerase & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g14441 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001039 UGE5 EC_5.1 racemase or epimerase & original description: CDS=1-1365 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022600 UGE5 EC_5.1 racemase or epimerase & original description: CDS=453-1574 0.03 OrthoFinder output from all 47 species
Spa_g04491 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038369_P001 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 6 329
No external refs found!