Solyc12g055810.1.1 (Solyc12g055810)


Aliases : Solyc12g055810

Description : AAA-ATPase At5g57480 OS=Arabidopsis thaliana (sp|q9fkm3|aatpk_arath : 692.0)


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g055810.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00036p00176790 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28580 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT4G25835 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G17760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Adi_g031480 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g054957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g42032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36939 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g55732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g61783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69592.t1 Aspi01Gene69592 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034525 No alias not classified & original description: CDS=1-2166 0.03 OrthoFinder output from all 47 species
Azfi_s0349.g066532 No alias not classified & original description: CDS=1-1605 0.05 OrthoFinder output from all 47 species
Cba_g04601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G052300.1 Ceric.01G052300 not classified & original description: pacid=50592955... 0.04 OrthoFinder output from all 47 species
Ceric.19G071000.1 Ceric.19G071000 not classified & original description: pacid=50575763... 0.04 OrthoFinder output from all 47 species
Ceric.19G071100.1 Ceric.19G071100 not classified & original description: pacid=50575396... 0.07 OrthoFinder output from all 47 species
Dac_g30278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_34239 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19260.1 AATP1, LOC_Os01g19260 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g45450.1 LOC_Os01g45450 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58790.1 LOC_Os03g58790 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28460.1 LOC_Os12g28460 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g13406 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Len_g40369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10435468g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g11419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017709 No alias not classified & original description: CDS=1-1293 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022181 No alias not classified & original description: CDS=1-984 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024038 No alias not classified & original description: CDS=1-1761 0.02 OrthoFinder output from all 47 species
Smo413949 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo419965 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g17334 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g42317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46110 AATP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011416_P001 Zm00001e011416 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e033043_P001 Zm00001e033043 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e038158_P001 AATP1, Zm00001e038158 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 241 311
IPR025753 AAA_N_dom 26 118
No external refs found!