Solyc12g044630.2.1 (PRF4, Solyc12g044630)


Aliases : PRF4, Solyc12g044630

Description : profilin actin nucleation protein


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g044630.2.1

Target Alias Description ECC score Gene Family Method Actions
AT2G19770 PRF5 profilin 5 0.09 OrthoFinder output from all 47 species
AT4G29340 PRF4 profilin 4 0.08 OrthoFinder output from all 47 species
Ala_g00728 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11589 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62552 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14096 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G066200.1 PFN1, PRF1,... profilin actin nucleation protein & original... 0.02 OrthoFinder output from all 47 species
Dac_g23730 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g05880.1 PRF5, LOC_Os06g05880 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g17660.1 PRF5, LOC_Os10g17660 profilin actin nucleation protein 0.1 OrthoFinder output from all 47 species
LOC_Os10g17680.1 PRF5, LOC_Os10g17680 profilin actin nucleation protein 0.1 OrthoFinder output from all 47 species
Len_g07662 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08402 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19813 PRF4 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24655 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10209 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36791 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26903 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09382 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09253 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027449_P001 PRF4, Zm00001e027449 profilin actin nucleation protein 0.05 OrthoFinder output from all 47 species
Zm00001e029081_P001 PRF5, Zm00001e029081 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species
Zm00001e032207_P001 PRF4, Zm00001e032207 profilin actin nucleation protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 1 133
No external refs found!