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  5. Solyc12g042910.2.1

Solyc12g042910.2.1 (UVR3, Solyc12g042910)


Aliases : UVR3, Solyc12g042910

Description : 6-4-type photolyase (UVR3)


Gene families : OG0005526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042910.2.1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000391.2 UVR3 DNA damage response.DNA repair... 0.02 OrthoFinder output from all 47 species
Dac_g23761 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05842 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017239001 UVR3 DNA damage response.DNA repair... 0.1 OrthoFinder output from all 47 species
Pir_g17871 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20466 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19732 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 296 492
IPR006050 DNA_photolyase_N 7 168
No external refs found!