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  5. Solyc12g042460.2.1

Solyc12g042460.2.1 (AT4CL2, 4CL2, Solyc12g042460)


Aliases : AT4CL2, 4CL2, Solyc12g042460

Description : p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042460.2.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10029.t1 4CL1, AT4CL1,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species
Dde_g18987 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g32420 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g34152 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g07084 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 457 532
IPR000873 AMP-dep_Synth/Lig_com 32 448
No external refs found!