Solyc12g042010.1.1 (Solyc12g042010)


Aliases : Solyc12g042010

Description : transcription factor (bHLH)


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042010.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00155460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00143370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.07 OrthoFinder output from all 47 species
AT1G70270 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
AT2G43060 IBH1 ILI1 binding bHLH 1 0.05 OrthoFinder output from all 47 species
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G57780 No alias EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12... 0.03 OrthoFinder output from all 47 species
Adi_g029675 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07118 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42814 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32990 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25846 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00957 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05093 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29507.t1 Aspi01Gene29507 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58768.t1 Aspi01Gene58768 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59361.t1 Aspi01Gene59361 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18708 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29136 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13027 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09598 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023743001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_14677 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_14678 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_30108 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_41387 HLH2, PAR2 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os01g14110.1 LOC_Os01g14110 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g56500.1 LOC_Os04g56500 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
LOC_Os08g31950.1 LOC_Os08g31950 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os09g20940.1 LOC_Os09g20940 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_100837g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_136890g0010 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
MA_209740g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_211492g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_29054g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_36564g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_6084g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_8629146g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_92262g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_946997g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_96570g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g05867 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05431 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25869 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22711 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41564 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023717_P001 Zm00001e023717 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!