Solyc12g036000.1.1 (YCF2.1, Solyc12g036000)

Aliases : YCF2.1, Solyc12g036000

Description : Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 189.0)

Gene families : OG0000305 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g036000.1.1
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
Solyc01g017130.1.1	YCF2.1, Solyc01g017130	Protein Ycf2 OS=Solanum tuberosum (sp\|q27ry7\|ycf2_soltu : 147.0)	0.1	OrthoFinder output from all 39 species
Solyc01g017280.1.1	YCF2.1, Solyc01g017280	Protein Ycf2 OS=Solanum lycopersicum...	0.11	OrthoFinder output from all 39 species
Solyc02g014780.1.1	YCF2.1, Solyc02g014780	Protein Ycf2 OS=Nicotiana tabacum (sp\|p09976\|ycf2_tobac : 133.0)	0.17	OrthoFinder output from all 39 species
Solyc03g058250.1.1	YCF2.1, Solyc03g058250	no hits & (original description: none)	0.05	OrthoFinder output from all 39 species
Solyc10g019010.1.1	YCF2.1, Solyc10g019010	Protein Ycf2 OS=Solanum tuberosum (sp\|q27ry7\|ycf2_soltu : 122.0)	0.09	OrthoFinder output from all 39 species
Solyc11g065050.1.1	YCF2.1, Solyc11g065050	Protein Ycf2 OS=Solanum lycopersicum...	0.07	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	IEA	Interproscan
CC	GO:0009536	plastid	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008146	sulfotransferase activity	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008543	Uncharacterised_Ycf2	7	128

External Links

No external refs found!