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  5. Solyc12g035360.2.1

Solyc12g035360.2.1 (Solyc12g035360)


Aliases : Solyc12g035360

Description : Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana (sp|q9lyk6|aprf1_arath : 526.0)


Gene families : OG0002761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g035360.2.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cba_g03158 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Mp2g16850.1 No alias auxiliary component S2Lb of COMPASS histone... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0098519 obsolete nucleotide phosphatase activity, acting on free nucleotides IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 106 143
IPR001680 WD40_repeat 24 53
IPR001680 WD40_repeat 251 271
No external refs found!