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  5. Solyc12g027580.3.1

Solyc12g027580.3.1 (Solyc12g027580)


Aliases : Solyc12g027580

Description : XPO4 nucleocytoplasmic transport karyopherin


Gene families : OG0004951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g027580.3.1

Target Alias Description ECC score Gene Family Method Actions
Cre09.g404350 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dcu_g51248 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33710.1 LOC_Os10g33710 XPO4 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Sam_g16315 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Tin_g45950 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!