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  5. Solyc12g020000.3.1

Solyc12g020000.3.1 (Solyc12g020000)


Aliases : Solyc12g020000

Description : no hits & (original description: none)


Gene families : OG0006180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g020000.3.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00155270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g021460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G043100.1 Ceric.04G043100 not classified & original description: pacid=50630795... 0.03 OrthoFinder output from all 47 species
Dcu_g12721 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g16716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_19843g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g24400.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g08026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
InterPro domains Description Start Stop
IPR028124 SMAP_dom 394 458
No external refs found!