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  5. LOC_Os03g61760.1

LOC_Os03g61760.1


Description : transcription factor (SBP)


Gene families : OG_01_0000102 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000102_tree ,
OG_02_0001192 (LandPlants) Phylogenetic Tree(s): OG_02_0001192_tree ,
OG_03_0006386 (SeedPlants) Phylogenetic Tree(s): OG_03_0006386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g61760.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00076020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
Cre09.g399289 No alias RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
LOC_Os08g40260.1 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_16835g0010 No alias Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_273100g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g13640.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c5_22750V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Pp3c6_6900V3.1 No alias squamosa promoter binding protein-like 8 0.01 Archaeplastida
Smo437670 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Zm00001e006252_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e011712_P002 No alias transcription factor (SBP) 0.04 Archaeplastida
AMTR_s00045p00076020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 LandPlants
LOC_Os08g40260.1 No alias transcription factor (SBP) 0.03 LandPlants
Smo437670 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 LandPlants
Zm00001e006252_P001 No alias transcription factor (SBP) 0.02 LandPlants
Zm00001e011712_P002 No alias transcription factor (SBP) 0.04 LandPlants
Zm00001e024393_P001 No alias transcription factor (SBP) 0.02 LandPlants
AMTR_s00045p00076020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 SeedPlants
Zm00001e006252_P001 No alias transcription factor (SBP) 0.02 SeedPlants
Zm00001e011712_P002 No alias transcription factor (SBP) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 152 225
No external refs found!