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  5. Solyc12g017380.3.1

Solyc12g017380.3.1 (3-Oct, ATOCT3, Solyc12g017380)


Aliases : 3-Oct, ATOCT3, Solyc12g017380

Description : organic cation transporter (OCT)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g017380.3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00167630 AtOCT1, 1-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00185090 2-Oct, ATOCT2,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00186620 3-Oct, ATOCT3,... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
AMTR_s00043p00126560 AtOCT4, 4-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AT1G79410 AtOCT5, 5-Oct organic cation/carnitine transporter5 0.07 OrthoFinder output from all 47 species
Adi_g086045 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17094 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70561 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G085500.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.22G012900.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012912001 AtOCT1, 1-Oct Solute transport.carrier-mediated transport.MFS... 0.05 OrthoFinder output from all 47 species
Gb_11984 AtOCT1, 1-Oct organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Gb_23093 3-Oct, ATOCT3 organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Gb_31020 AtOCT1, 1-Oct organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g22710.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
LOC_Os07g37510.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.07 OrthoFinder output from all 47 species
Len_g08973 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39356 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436973g0010 AtOCT1, 1-Oct organic cation transporter (OCT) 0.07 OrthoFinder output from all 47 species
MA_72332g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g15970.1 AtOCT4, 4-Oct organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
Ore_g09748 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15859 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g053860.4.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.06 OrthoFinder output from all 47 species
Solyc07g063920.3.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.05 OrthoFinder output from all 47 species
Solyc10g074850.3.1 3-Oct, ATOCT3,... Organic cation/carnitine transporter 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e041723_P001 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 87 277
No external refs found!