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  5. Solyc12g017350.2.1

Solyc12g017350.2.1 (Solyc12g017350)


Aliases : Solyc12g017350

Description : manganese cation transporter (Mn-CDF)


Gene families : OG0000679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000679_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g017350.2.1

Target Alias Description ECC score Gene Family Method Actions
AT3G58060 No alias Cation efflux family protein 0.03 OrthoFinder output from all 47 species
Ala_g05877 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54994.t1 ATMTP11, MTP11,... manganese cation transporter *(Mn-CDF) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G066600.1 ATMTP11, MTP11,... manganese cation transporter *(Mn-CDF) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g11532 No alias manganese cation transporter *(Mn-CDF) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27158 No alias manganese cation transporter *(Mn-CDF) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g12530.1 LOC_Os03g12530 manganese cation transporter (Mn-CDF) 0.03 OrthoFinder output from all 47 species
Len_g01746 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g26235 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.03 OrthoFinder output from all 47 species
Pp3c3_30490V3.1 Pp3c3_30490 Cation efflux family protein 0.03 OrthoFinder output from all 47 species
Ppi_g56237 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.01 OrthoFinder output from all 47 species
Sam_g38009 No alias manganese cation transporter *(Mn-CDF) & original... 0.02 OrthoFinder output from all 47 species
Smo173239 ATMTP11, MTP11 Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
Spa_g24012 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.04 OrthoFinder output from all 47 species
Spa_g42424 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.03 OrthoFinder output from all 47 species
Tin_g00734 ATMTP11, MTP11 manganese cation transporter *(Mn-CDF) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e019356_P001 ATMTP11, MTP11,... manganese cation transporter (Mn-CDF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEA Interproscan
MF GO:0008324 monoatomic cation transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR002524 Cation_efflux 32 222
IPR027470 Cation_efflux_CTD 229 303
No external refs found!