LOC_Os03g61630.2


Description : scaffolding component Sec13 of coat protein complex


Gene families : OG_01_0002497 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002497_tree ,
OG_02_0002542 (LandPlants) Phylogenetic Tree(s): OG_02_0002542_tree ,
OG_03_0013973 (SeedPlants) Phylogenetic Tree(s): OG_03_0013973_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g61630.2
Cluster HCCA: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000939.9 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Cre17.g715750 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
MA_47428g0010 No alias Protein transport protein SEC13 homolog B OS=Arabidopsis... 0.03 Archaeplastida
Mp4g02570.1 No alias scaffolding component Sec13 of coat protein complex 0.02 Archaeplastida
Pp3c19_12500V3.1 No alias transducin family protein / WD-40 repeat family protein 0.03 Archaeplastida
Pp3c19_9370V3.1 No alias transducin family protein / WD-40 repeat family protein 0.03 Archaeplastida
Solyc02g087300.1.1 No alias scaffolding component Sec13 of coat protein complex 0.03 Archaeplastida
Zm00001e016458_P001 No alias scaffolding component Sec13 of coat protein complex 0.02 Archaeplastida
AT2G30050 No alias transducin family protein / WD-40 repeat family protein 0.02 LandPlants
MA_47428g0010 No alias Protein transport protein SEC13 homolog B OS=Arabidopsis... 0.03 LandPlants
Mp4g02570.1 No alias scaffolding component Sec13 of coat protein complex 0.02 LandPlants
Pp3c19_12500V3.1 No alias transducin family protein / WD-40 repeat family protein 0.03 LandPlants
Pp3c19_9370V3.1 No alias transducin family protein / WD-40 repeat family protein 0.02 LandPlants
Solyc02g087300.1.1 No alias scaffolding component Sec13 of coat protein complex 0.03 LandPlants
Zm00001e016458_P001 No alias scaffolding component Sec13 of coat protein complex 0.02 LandPlants
Zm00001e033208_P004 No alias no hits & (original description: none) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 96 132
IPR001680 WD40_repeat 48 87
No external refs found!