1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g015910.1.1

Solyc12g015910.1.1 (EMB1374, ATSUFE,...)


Aliases : EMB1374, ATSUFE, SUFE1, CPSUFE, Solyc12g015910

Description : component SUF-E1 of plastidial SUF system assembly phase


Gene families : OG0002631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002631_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g015910.1.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Aob_g05098 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Aspi01Gene52591.t1 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.24 EMB1374, ATSUFE,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 OrthoFinder output from all 47 species
Cre06.g309717 EMB1374, ATSUFE,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.02 OrthoFinder output from all 47 species
GSVIVT01014835001 EMB1374, ATSUFE,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
LOC_Os09g09790.1 EMB1374, ATSUFE,... component SUF-E1 of plastidial SUF system assembly phase 0.03 OrthoFinder output from all 47 species
Len_g01724 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
MA_17072g0020 EMB1374, ATSUFE,... component SUF-E1 of plastidial SUF system assembly phase 0.04 OrthoFinder output from all 47 species
MA_181487g0010 EMB1374, ATSUFE,... SufE-like protein 1, chloroplastic/mitochondrial... 0.04 OrthoFinder output from all 47 species
Mp7g18130.1 EMB1374, ATSUFE,... component SUF-E1 of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Pp3c6_3890V3.1 EMB1374, ATSUFE,... chloroplast sulfur E 0.02 OrthoFinder output from all 47 species
Tin_g43827 EMB1374, ATSUFE,... maturation factor SUF-E1 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002634 BolA 271 349
IPR003808 Fe-S_metab-assoc_dom 80 199
No external refs found!