Solyc12g015640.2.1 (Solyc12g015640)


Aliases : Solyc12g015640

Description : transcription factor (mTERF)


Gene families : OG0007385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g015640.2.1

Target Alias Description ECC score Gene Family Method Actions
AT5G55580 No alias Mitochondrial transcription termination factor family protein 0.08 OrthoFinder output from all 47 species
Als_g10518 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G038100.1 Ceric.31G038100 ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11871 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.07 OrthoFinder output from all 47 species
Dde_g08858 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01037780001 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39430.1 LOC_Os07g39430 transcription factor (mTERF) 0.07 OrthoFinder output from all 47 species
Len_g19721 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12364 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g02140 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Tin_g09512 No alias ribosome biogenesis factor *(mTERF9)) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010645_P002 Zm00001e010645 transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003690 MTERF 176 249
IPR003690 MTERF 238 434
No external refs found!