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  5. Solyc12g013890.2.1

Solyc12g013890.2.1 (emb2737, EMB64, Solyc12g013890)


Aliases : emb2737, EMB64, Solyc12g013890

Description : no hits & (original description: none)


Gene families : OG0008639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g013890.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00160530 emb2737, EMB64,... No description available 0.03 OrthoFinder output from all 47 species
AT5G53860 emb2737, EMB64 embryo defective 2737 0.1 OrthoFinder output from all 47 species
Adi_g114622 emb2737, EMB64 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11753 emb2737, EMB64 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0060.g034782 emb2737, EMB64 not classified & original description: CDS=1-1167 0.03 OrthoFinder output from all 47 species
Dcu_g01312 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14757 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05374 emb2737, EMB64 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10277514g0010 emb2737, EMB64 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_21950g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g10630.1 emb2737, EMB64 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Sam_g48963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39929 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07292 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!