Solyc12g013880.2.1 (ORC3, ATORC3, Solyc12g013880)

Aliases : ORC3, ATORC3, Solyc12g013880

Description : component ORC3 of origin recognition complex

Gene families : OG0006133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006133_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g013880.2.1
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Ceric.22G025100.1	ORC3, ATORC3,...	component *(ORC3) of origin recognition complex &...	0.05	OrthoFinder output from all 47 species
Dcu_g19092	ORC3, ATORC3	component *(ORC3) of origin recognition complex &...	0.06	OrthoFinder output from all 47 species
LOC_Os10g26280.1	ORC3, ATORC3,...	component ORC3 of origin recognition complex	0.02	OrthoFinder output from all 47 species
MA_289035g0010	ORC3, ATORC3	component ORC3 of origin recognition complex	0.04	OrthoFinder output from all 47 species
Mp3g18090.1	ORC3, ATORC3	component ORC3 of origin recognition complex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005664	nuclear origin of replication recognition complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003909	DNA ligase activity	IEP	HCCA
MF	GO:0003910	DNA ligase (ATP) activity	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0036297	interstrand cross-link repair	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
CC	GO:0043240	Fanconi anaemia nuclear complex	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020795	ORC3	209	342
IPR020795	ORC3	55	189
IPR040855	ORC_WH_C	596	720

External Links

No external refs found!