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  5. Solyc12g013700.2.1

Solyc12g013700.2.1 (Solyc12g013700)


Aliases : Solyc12g013700

Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 110.0)


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g013700.2.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00269560 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
AMTR_s00009p00267130 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00066790 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Adi_g012224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0174.g055900 No alias not classified & original description: CDS=333-1163 0.02 OrthoFinder output from all 47 species
Cre09.g391171 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g01336 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01014386001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
Gb_00539 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.01 OrthoFinder output from all 47 species
Gb_16125 ATAILP1, AILP1 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Gb_40778 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Lfl_g21141 ATAILP1, AILP1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g29541 ATAILP1, AILP1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_456616g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g25366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 2 229
No external refs found!