Solyc12g013630.1.1 (Solyc12g013630)

Aliases : Solyc12g013630

Description : subfamily ABCG transporter

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g013630.1.1
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00258490	ABCG14,...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
AMTR_s00030p00144980	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00057p00214480	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00061p00187570	ABCG26, WBC27,...	Solute transport.primary active transport.ABC...	0.11	OrthoFinder output from all 47 species
AMTR_s00134p00069640	ABCG25,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT3G13220	ABCG26, WBC27	ABC-2 type transporter family protein	0.15	OrthoFinder output from all 47 species
Adi_g018185	ABCG26, WBC27	sporopollenin precursor exporter *(ABCG26) & original...	0.02	OrthoFinder output from all 47 species
Adi_g088059	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g107318	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g06772	No alias	sporopollenin precursor exporter *(ABCG26) & original...	0.03	OrthoFinder output from all 47 species
Ala_g19172	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g29670	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21658	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene01671.t1	Aspi01Gene01671	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10922.t1	Aspi01Gene10922	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06567	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G057300.1	ABCG26, WBC27,...	subfamily ABCG transporter & original description:...	0.07	OrthoFinder output from all 47 species
Cre17.g717050	No alias	ABC transporter G family member 21 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g07574	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g11548	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g34069	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.08	OrthoFinder output from all 47 species
Dde_g47725	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.14	OrthoFinder output from all 47 species
GSVIVT01001660001	No alias	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
GSVIVT01014402001	No alias	Solute transport.primary active transport.ABC...	0.07	OrthoFinder output from all 47 species
GSVIVT01014733001	ABCG26, WBC27	Solute transport.primary active transport.ABC...	0.16	OrthoFinder output from all 47 species
Gb_00289	ABCG26, WBC27	sporopollenin precursor exporter. subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os06g40550.1	ABCG26, WBC27,...	sporopollenin precursor exporter. subfamily ABCG transporter	0.16	OrthoFinder output from all 47 species
Len_g07347	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
MA_16472g0010	ABCG26, WBC27	ABC transporter G family member 26 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
MA_16472g0020	ABCG26, WBC27	ABC transporter G family member 26 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_81274g0010	ABCG14	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Mp3g19930.1	ABCG26, WBC27	ABC transporter G family member 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp6g05900.1	ABCG14	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Nbi_g10128	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g29229	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g44059	ABCG26, WBC27	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Pnu_g16739	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13835	ABCG26, WBC27	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g57469	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589	No alias	not classified & original description: CDS=22-1557	0.02	OrthoFinder output from all 47 species
Sam_g30198	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g006960.3.1	Solyc04g006960	cytokinin transporter (ABCG14). subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Spa_g05719	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.09	OrthoFinder output from all 47 species
Spa_g06146	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g18374	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e037432_P001	ABCG26, WBC27,...	sporopollenin precursor exporter. subfamily ABCG transporter	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	61	212
IPR013525	ABC_2_trans	364	568

External Links

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Solyc12g013630.1.1 (Solyc12g013630)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation