1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g013580.3.1

Solyc12g013580.3.1 (Solyc12g013580)


Aliases : Solyc12g013580

Description : protein folding catalyst


Gene families : OG0005662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005662_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g013580.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00257280 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.1 OrthoFinder output from all 47 species
AT3G15520 No alias Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.15 OrthoFinder output from all 47 species
Adi_g025646 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.02 OrthoFinder output from all 47 species
Aev_g06652 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.03 OrthoFinder output from all 47 species
Aob_g18209 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.05 OrthoFinder output from all 47 species
Aop_g04430 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.07 OrthoFinder output from all 47 species
Azfi_s0068.g036305 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.07 OrthoFinder output from all 47 species
Cba_g31364 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.03 OrthoFinder output from all 47 species
Ceric.25G015100.1 Ceric.25G015100 peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.1 OrthoFinder output from all 47 species
Cre06.g303300 No alias Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Dac_g03245 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.07 OrthoFinder output from all 47 species
Dcu_g01252 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.08 OrthoFinder output from all 47 species
Dde_g03823 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.04 OrthoFinder output from all 47 species
Ehy_g31079 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01014408001 No alias Protein modification.protein folding and quality... 0.09 OrthoFinder output from all 47 species
Gb_21662 No alias Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic... 0.06 OrthoFinder output from all 47 species
Gb_26967 No alias protein folding catalyst 0.02 OrthoFinder output from all 47 species
Gb_26968 No alias Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os07g37830.1 LOC_Os07g37830 protein folding catalyst 0.14 OrthoFinder output from all 47 species
Len_g11343 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.1 OrthoFinder output from all 47 species
Lfl_g30212 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.07 OrthoFinder output from all 47 species
MA_10432513g0010 No alias protein folding catalyst 0.05 OrthoFinder output from all 47 species
MA_322724g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp2g15670.1 No alias protein folding catalyst 0.08 OrthoFinder output from all 47 species
Msp_g26996 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.04 OrthoFinder output from all 47 species
Nbi_g11279 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.1 OrthoFinder output from all 47 species
Ore_g16989 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.06 OrthoFinder output from all 47 species
Pir_g18317 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.05 OrthoFinder output from all 47 species
Pp3c13_22210V3.1 Pp3c13_22210 Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.03 OrthoFinder output from all 47 species
Ppi_g02891 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013141 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.03 OrthoFinder output from all 47 species
Sam_g14399 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.02 OrthoFinder output from all 47 species
Sam_g51072 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.04 OrthoFinder output from all 47 species
Smo73714 No alias Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
Spa_g05657 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.12 OrthoFinder output from all 47 species
Tin_g08196 No alias peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &... 0.07 OrthoFinder output from all 47 species
Zm00001e010571_P001 Zm00001e010571 protein folding catalyst 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 282 430
No external refs found!