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  5. Solyc12g011233.1.1

Solyc12g011233.1.1 (CRK8, Solyc12g011233)


Aliases : CRK8, Solyc12g011233

Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 164.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g011233.1.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Solyc01g009975.1.1 CRK8, Solyc01g009975 Uncharacterized mitochondrial protein AtMg00810... 0.01 OrthoFinder output from all 47 species
Solyc01g066445.1.1 ORF240B, Solyc01g066445 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Solyc02g014547.1.1 CRK8, Solyc02g014547 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Solyc03g044748.1.1 CRK8, Solyc03g044748 Retrovirus-related Pol polyprotein from transposon RE2... 0.01 OrthoFinder output from all 47 species
Solyc04g055225.1.1 CRK8, Solyc04g055225 Uncharacterized mitochondrial protein AtMg00810... 0.04 OrthoFinder output from all 47 species
Solyc06g048825.1.1 CRK8, Solyc06g048825 Retrovirus-related Pol polyprotein from transposon RE2... 0.01 OrthoFinder output from all 47 species
Solyc12g062855.1.1 CRK8, Solyc12g062855 Uncharacterized mitochondrial protein AtMg00810... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 285 383
No external refs found!