1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g010510.2.1

Solyc12g010510.2.1 (ORP1C, Solyc12g010510)


Aliases : ORP1C, Solyc12g010510

Description : Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana (sp|q8l751|orp1c_arath : 652.0)


Gene families : OG0001490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001490_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g010510.2.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153070 ORP1C,... Oxysterol-binding protein-related protein 1C... 0.08 OrthoFinder output from all 47 species
AMTR_s00086p00150620 ORP2A,... Oxysterol-binding protein-related protein 2A... 0.03 OrthoFinder output from all 47 species
AT2G31020 ORP1A OSBP(oxysterol binding protein)-related protein 1A 0.03 OrthoFinder output from all 47 species
Als_g20575 ORP1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04487 ORP1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40499.t1 ORP1C, Aspi01Gene40499 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G111700.1 ORP1C, Ceric.01G111700 not classified & original description: pacid=50590832... 0.02 OrthoFinder output from all 47 species
Dcu_g06451 ORP1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07111 ORP1C not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000586001 ORP1D Oxysterol-binding protein-related protein 1D... 0.03 OrthoFinder output from all 47 species
GSVIVT01001290001 ORP2A Oxysterol-binding protein-related protein 2A... 0.03 OrthoFinder output from all 47 species
GSVIVT01001291001 ORP2A Oxysterol-binding protein-related protein 2A... 0.02 OrthoFinder output from all 47 species
GSVIVT01022401001 ORP1C Oxysterol-binding protein-related protein 1C... 0.04 OrthoFinder output from all 47 species
Gb_04474 ORP1C Oxysterol-binding protein-related protein 1A... 0.05 OrthoFinder output from all 47 species
Gb_34620 ORP1C Oxysterol-binding protein-related protein 1C... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40590.1 ORP2A, LOC_Os10g40590 Oxysterol-binding protein-related protein 2A... 0.04 OrthoFinder output from all 47 species
Lfl_g04231 ORP1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g013190.2.1 ORP1C, Solyc11g013190 Oxysterol-binding protein-related protein 1C... 0.04 OrthoFinder output from all 47 species
Tin_g03503 ORP1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10645 ORP1C not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000648 Oxysterol-bd 292 638
No external refs found!