1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g009300.3.1

Solyc12g009300.3.1 (ATSUS4, SUS4, Solyc12g009300)


Aliases : ATSUS4, SUS4, Solyc12g009300

Description : sucrose synthase


Gene families : OG0001258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001258_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009300.3.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00019920 ATSUS3, SUS3,... Carbohydrate metabolism.sucrose... 0.03 OrthoFinder output from all 47 species
Adi_g054690 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087028 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20982 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38079 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031336 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: CDS=2426-3058 0.03 OrthoFinder output from all 47 species
Cba_g15095 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G059900.1 ATSUS3, SUS3,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G060100.1 ATSUS3, SUS3,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G000400.1 ATSUS3, SUS3,... EC_2.4 glycosyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g35672 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029388001 ATSUS6, SUS6 Carbohydrate metabolism.sucrose... 0.03 OrthoFinder output from all 47 species
LOC_Os03g28330.4 ATSUS4, SUS4,... sucrose synthase 0.02 OrthoFinder output from all 47 species
LOC_Os07g42490.1 ATSUS4, SUS4,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Len_g03876 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430807g0030 ATSUS3, SUS3 sucrose synthase 0.04 OrthoFinder output from all 47 species
MA_319g0010 ATSUS3, SUS3 sucrose synthase 0.02 OrthoFinder output from all 47 species
MA_319g0020 ATSUS3, SUS3 sucrose synthase 0.03 OrthoFinder output from all 47 species
Msp_g26972 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01368 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32514 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013407 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: CDS=27-2423 0.03 OrthoFinder output from all 47 species
Sam_g15885 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g042520.4.1 ASUS1, atsus1,... sucrose synthase 0.04 OrthoFinder output from all 47 species
Spa_g15194 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEA Interproscan
MF GO:0016157 sucrose synthase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000368 Sucrose_synth 8 553
IPR001296 Glyco_trans_1 565 737
No external refs found!