1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g009280.3.1

Solyc12g009280.3.1 (Solyc12g009280)


Aliases : Solyc12g009280

Description : no hits & (original description: none)


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009280.3.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00261250 evm_27.TU.AmTr_v1... Auxin-induced protein 6B OS=Glycine max 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00198570 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00204p00023040 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G79130 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT2G36210 No alias SAUR-like auxin-responsive protein family 0.06 OrthoFinder output from all 47 species
AT3G20220 No alias SAUR-like auxin-responsive protein family 0.06 OrthoFinder output from all 47 species
AT3G43120 No alias SAUR-like auxin-responsive protein family 0.05 OrthoFinder output from all 47 species
AT5G10990 No alias SAUR-like auxin-responsive protein family 0.04 OrthoFinder output from all 47 species
Adi_g008460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06538.t1 Aspi01Gene06538 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45044.t1 Aspi01Gene45044 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45399.t1 Aspi01Gene45399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G052400.1 Ceric.02G052400 not classified & original description: pacid=50585230... 0.02 OrthoFinder output from all 47 species
Ceric.11G079900.1 Ceric.11G079900 not classified & original description: pacid=50595556... 0.04 OrthoFinder output from all 47 species
Ceric.32G072700.1 Ceric.32G072700 not classified & original description: pacid=50598638... 0.02 OrthoFinder output from all 47 species
Dac_g29405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015023001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_02938 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_02943 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_16068 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g24700.1 LOC_Os02g24700 Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56680.1 LOC_Os04g56680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g48850.1 LOC_Os06g48850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g48860.1 LOC_Os06g48860 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g37834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10386g0020 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10428249g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10431311g0020 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10433051g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10434931g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_105570g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10901g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_2280g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_49513g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_7961531g0010 No alias Indole-3-acetic acid-induced protein ARG7 OS=Vigna... 0.03 OrthoFinder output from all 47 species
MA_803550g0010 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_85990g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_91102g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g12270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g31072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025395 No alias not classified & original description: CDS=1-432 0.03 OrthoFinder output from all 47 species
Sam_g23196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g110890.1.1 Solyc01g110890 Auxin-induced protein X10A OS=Glycine max... 0.01 OrthoFinder output from all 47 species
Solyc07g042470.3.1 Solyc07g042470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g045060.1.1 Solyc07g045060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g089270.1.1 Solyc12g089270 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g13073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014637_P001 Zm00001e014637 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030223_P001 Zm00001e030223 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034248_P002 Zm00001e034248 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e036256_P001 Zm00001e036256 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 69 156
No external refs found!