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  5. Solyc12g008760.3.1

Solyc12g008760.3.1 (ATPRMT11, ATPRMT1B,...)


Aliases : ATPRMT11, ATPRMT1B, PRMT11, PRMT1B, Solyc12g008760

Description : histone methylase (PRMT1)


Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g008760.3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT2G19670 PRMT1A, ATPRMT1A protein arginine methyltransferase 1A 0.03 OrthoFinder output from all 47 species
AT3G12270 PRMT3, ATPRMT3 protein arginine methyltransferase 3 0.09 OrthoFinder output from all 47 species
AT4G29510 ATPRMT11,... arginine methyltransferase 11 0.12 OrthoFinder output from all 47 species
Adi_g078470 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16146 ATPRMT6, PRMT6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10441 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009862 ATPRMT11,... histone methylase *(PRMT1) & original description: CDS=2-1123 0.03 OrthoFinder output from all 47 species
Azfi_s0553.g076649 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.05 OrthoFinder output from all 47 species
Ceric.05G067400.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.08 OrthoFinder output from all 47 species
Ceric.36G007700.1 ATPRMT11,... histone methylase *(PRMT1) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.36 PRMT1A, ATPRMT1A Probable protein arginine N-methyltransferase 1.2... 0.02 OrthoFinder output from all 47 species
Cre16.g685900 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.1 OrthoFinder output from all 47 species
Dcu_g01884 ATPRMT6, PRMT6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11233 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.04 OrthoFinder output from all 47 species
GSVIVT01015236001 ATPRMT11,... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
GSVIVT01036648001 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.12 OrthoFinder output from all 47 species
Gb_03001 ATPRMT6, PRMT6 Probable protein arginine N-methyltransferase 6... 0.04 OrthoFinder output from all 47 species
Gb_34867 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.04 OrthoFinder output from all 47 species
LOC_Os07g44640.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.11 OrthoFinder output from all 47 species
LOC_Os09g19560.1 ATPRMT11,... histone methylase (PRMT1) 0.16 OrthoFinder output from all 47 species
LOC_Os10g34740.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.2... 0.04 OrthoFinder output from all 47 species
MA_4448g0020 ATPRMT11,... Probable protein arginine N-methyltransferase 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_6268g0020 PRMT3, ATPRMT3 Probable protein arginine N-methyltransferase 3 OS=Oryza... 0.09 OrthoFinder output from all 47 species
Mp5g00320.1 ATPRMT11,... histone methylase (PRMT1) 0.06 OrthoFinder output from all 47 species
Mp5g14740.1 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.07 OrthoFinder output from all 47 species
Sam_g09560 No alias histone methylase *(PRMT1) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26734 No alias ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Smo95789 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.04 OrthoFinder output from all 47 species
Spa_g10713 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Spa_g12196 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05071 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033500_P001 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.1 OrthoFinder output from all 47 species
Zm00001e033907_P001 ATPRMT11,... histone methylase (PRMT1) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!