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  5. Solyc12g007120.2.1

Solyc12g007120.2.1 (PLSP1, Solyc12g007120)


Aliases : PLSP1, Solyc12g007120

Description : plastidic signal peptidase (PLSP/TPP)


Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g007120.2.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT3G24590 PLSP1 plastidic type i signal peptidase 1 0.04 OrthoFinder output from all 47 species
Als_g21840 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Aop_g37559 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene23931.t1 PLSP1, Aspi01Gene23931 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031335 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.06 OrthoFinder output from all 47 species
Cba_g19010 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G075600.1 PLSP1, Ceric.10G075600 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.48 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.02 OrthoFinder output from all 47 species
Cre07.g344350 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.07 OrthoFinder output from all 47 species
Ehy_g10823 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015377001 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.04 OrthoFinder output from all 47 species
Gb_36328 PLSP1 plastidic signal peptidase (PLSP/TPP) 0.04 OrthoFinder output from all 47 species
LOC_Os02g16709.1 PLSP1, LOC_Os02g16709 plastidic signal peptidase (PLSP/TPP) 0.11 OrthoFinder output from all 47 species
Len_g29994 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Ore_g19818 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g19357 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g55222 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008016 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Tin_g15463 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e014232_P002 PLSP1, Zm00001e014232 plastidic signal peptidase (PLSP/TPP) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019533 Peptidase_S26 169 267
No external refs found!