1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g006920.2.1

Solyc12g006920.2.1 (Solyc12g006920)


Aliases : Solyc12g006920

Description : regulatory component B1 of PP2A phosphatase complexes


Gene families : OG0000345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006920.2.1
Cluster HCCA: Cluster_20

  • Target Alias Description ECC score Gene Family Method Actions
    AT3G09880 ATB' BETA Protein phosphatase 2A regulatory B subunit family protein 0.03 OrthoFinder output from all 47 species
    AT5G25510 No alias Protein phosphatase 2A regulatory B subunit family protein 0.03 OrthoFinder output from all 47 species
    Aop_g02573 No alias regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
    Aspi01Gene47096.t1 ATB' BETA,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
    Cba_g02666 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
    Cpa|evm.model.tig00001265.17 ATB' BETA Protein modification.dephosphorylation.serine/threonine... 0.01 OrthoFinder output from all 47 species
    Dac_g13022 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
    GSVIVT01010318001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
    LOC_Os08g02860.1 ATB' GAMMA,... regulatory component B1 of PP2A phosphatase complexes 0.03 OrthoFinder output from all 47 species
    LOC_Os09g37060.1 ATB' ALPHA,... regulatory component B1 of PP2A phosphatase complexes 0.03 OrthoFinder output from all 47 species
    Msp_g02043 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.04 OrthoFinder output from all 47 species
    Zm00001e026474_P002 Zm00001e026474 regulatory component B1 of PP2A phosphatase complexes 0.03 OrthoFinder output from all 47 species
    Zm00001e031176_P002 Zm00001e031176 regulatory component B1 of PP2A phosphatase complexes 0.06 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source
    CC GO:0000159 protein phosphatase type 2A complex IEA Interproscan
    BP GO:0007165 signal transduction IEA Interproscan
    MF GO:0019888 protein phosphatase regulator activity IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0003774 cytoskeletal motor activity IEP HCCA
    MF GO:0003777 microtubule motor activity IEP HCCA
    MF GO:0004672 protein kinase activity IEP HCCA
    MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
    MF GO:0005515 protein binding IEP HCCA
    MF GO:0005524 ATP binding IEP HCCA
    BP GO:0006468 protein phosphorylation IEP HCCA
    BP GO:0006793 phosphorus metabolic process IEP HCCA
    BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
    BP GO:0007017 microtubule-based process IEP HCCA
    BP GO:0007018 microtubule-based movement IEP HCCA
    MF GO:0008017 microtubule binding IEP HCCA
    MF GO:0015631 tubulin binding IEP HCCA
    MF GO:0016301 kinase activity IEP HCCA
    BP GO:0016310 phosphorylation IEP HCCA
    MF GO:0016740 transferase activity IEP HCCA
    MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
    MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
    BP GO:0019538 protein metabolic process IEP HCCA
    BP GO:0036211 protein modification process IEP HCCA
    BP GO:0043170 macromolecule metabolic process IEP HCCA
    BP GO:0043412 macromolecule modification IEP HCCA
    MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
    BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
    InterPro domains Description Start Stop
    IPR002554 PP2A_B56 77 482
    No external refs found!