1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g006850.2.1

Solyc12g006850.2.1 (ATAKT1, AKT1, KT1,...)


Aliases : ATAKT1, AKT1, KT1, Solyc12g006850

Description : voltage-gated potassium cation channel (AKT/SKOR/GORK)


Gene families : OG0000357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006850.2.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g04472 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.01 OrthoFinder output from all 47 species
Dcu_g25302 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.04 OrthoFinder output from all 47 species
Gb_11173 KAT2 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
Len_g07871 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Mp5g22750.1 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
Ppi_g14424 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 64 308
IPR020683 DUF3447 533 621
IPR020683 DUF3447 630 711
IPR021789 KHA_dom 807 869
IPR000595 cNMP-bd_dom 401 485
No external refs found!