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Aliases : Solyc12g006420
Description : mRNA decay factor (PAT1)
Gene families : OG0002686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002686_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G14990 | No alias | Topoisomerase II-associated protein PAT1 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g04164 | No alias | mRNA decay factor *(PAT1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g08221 | No alias | mRNA decay factor *(PAT1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G051000.1 | Ceric.32G051000 | mRNA decay factor *(PAT1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021357.9 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05032 | No alias | mRNA decay factor *(PAT1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015721001 | No alias | Protein PAT1 homolog 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g56300.1 | LOC_Os01g56300 | mRNA decay factor (PAT1) | 0.08 | OrthoFinder output from all 47 species | |
| Len_g20620 | No alias | mRNA decay factor *(PAT1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14040.1 | No alias | mRNA decay factor (PAT1) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18304 | No alias | mRNA decay factor *(PAT1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g016240.4.1 | Solyc05g016240 | mRNA decay factor (PAT1) | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12791 | No alias | mRNA decay factor *(PAT1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026088_P001 | Zm00001e026088 | mRNA decay factor (PAT1) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
| BP | GO:0040008 | regulation of growth | IEP | HCCA |
| BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |