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  5. Solyc12g006350.3.1

Solyc12g006350.3.1 (ARF6, Solyc12g006350)


Aliases : ARF6, Solyc12g006350

Description : transcription factor (ARF)


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006350.3.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267580 ARF19, IAA22,... RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
AMTR_s00036p00215270 ARF21,... Auxin response factor 7 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
AT1G19220 ARF19, IAA22, ARF11 auxin response factor 19 0.06 OrthoFinder output from all 47 species
AT1G30330 ARF6 auxin response factor 6 0.01 OrthoFinder output from all 47 species
AT1G77850 ARF17 auxin response factor 17 0.02 OrthoFinder output from all 47 species
Adi_g057783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15630 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51944 ARF19, IAA22, ARF11 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05880.t1 ARF19, IAA22,... ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001367 ARF10 ARF-type transcription factor & original description: CDS=1-2124 0.04 OrthoFinder output from all 47 species
Cba_g09882 ARF1 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.35G054000.1 ARF6, Ceric.35G054000 ARF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g08691 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g22354 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025159001 ARF4 RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
Gb_31132 ARF4 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g35140.1 ARF1, LOC_Os02g35140 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
LOC_Os02g41800.1 ARF16, LOC_Os02g41800 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Len_g14087 ARF1 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20412 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g05750 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432528g0010 ARF4 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
MA_5089g0010 TIR5, MSG1,... Auxin response factor 7 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g15236 ARF1 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33451 ARF10 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010740 TIR5, MSG1,... ARF-type transcription factor & original description: CDS=1-2400 0.02 OrthoFinder output from all 47 species
Solyc11g069500.2.1 ARF10, Solyc11g069500 transcription factor (ARF) 0.17 OrthoFinder output from all 47 species
Zm00001e013061_P001 ARF16, Zm00001e013061 transcription factor (ARF) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!