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  5. Solyc12g006000.1.1

Solyc12g006000.1.1 (Solyc12g006000)


Aliases : Solyc12g006000

Description : clathrin assembly protein (AP180)


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006000.1.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00161520 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.13 OrthoFinder output from all 47 species
AMTR_s00050p00195040 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00051500 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.08 OrthoFinder output from all 47 species
AMTR_s00106p00058730 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AT1G03050 No alias ENTH/ANTH/VHS superfamily protein 0.15 OrthoFinder output from all 47 species
AT2G25430 No alias epsin N-terminal homology (ENTH) domain-containing... 0.03 OrthoFinder output from all 47 species
AT4G02650 No alias ENTH/ANTH/VHS superfamily protein 0.16 OrthoFinder output from all 47 species
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G57200 No alias ENTH/ANTH/VHS superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g015730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02194 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14788 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g21349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08469 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.03 OrthoFinder output from all 47 species
Cba_g03939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G031300.1 Ceric.06G031300 not classified & original description: pacid=50619961... 0.03 OrthoFinder output from all 47 species
Ceric.34G007000.1 Ceric.34G007000 not classified & original description: pacid=50623589... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.123 No alias Putative clathrin assembly protein At4g25940... 0.02 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Dac_g10551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04015 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.12 OrthoFinder output from all 47 species
GSVIVT01030504001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
GSVIVT01035864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Gb_35012 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species
LOC_Os02g07900.1 LOC_Os02g07900 ECA1/2 clathrin coated vesicle adaptor protein 0.1 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species
LOC_Os05g02140.1 LOC_Os05g02140 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g35160.1 LOC_Os05g35160 ECA1/2 clathrin coated vesicle adaptor protein 0.04 OrthoFinder output from all 47 species
LOC_Os06g45050.1 LOC_Os06g45050 Putative clathrin assembly protein At5g57200... 0.07 OrthoFinder output from all 47 species
Lfl_g07050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07861 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g011450.3.1 Solyc06g011450 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.06 OrthoFinder output from all 47 species
Solyc12g010530.3.1 Solyc12g010530 Putative clathrin assembly protein At5g35200... 0.04 OrthoFinder output from all 47 species
Zm00001e013776_P003 Zm00001e013776 ECA1/2 clathrin coated vesicle adaptor protein 0.09 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.12 OrthoFinder output from all 47 species
Zm00001e030401_P001 Zm00001e030401 ECA1/2 clathrin coated vesicle adaptor protein 0.11 OrthoFinder output from all 47 species
Zm00001e036365_P001 Zm00001e036365 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Zm00001e038481_P001 Zm00001e038481 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 30 317
No external refs found!