LOC_Os03g60870.1


Description : A-class RAB GTPase


Gene families : OG_01_0000173 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000173_tree ,
OG_02_0000161 (LandPlants) Phylogenetic Tree(s): OG_02_0000161_tree ,
OG_03_0000127 (SeedPlants) Phylogenetic Tree(s): OG_03_0000127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g60870.1
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00189630 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 Archaeplastida
AT4G18800 ATHSGBP, RABA1d,... RAB GTPase homolog A1D 0.02 Archaeplastida
GSVIVT01023225001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
LOC_Os10g23100.1 No alias A-class RAB GTPase 0.03 Archaeplastida
MA_10434967g0010 No alias A-class RAB GTPase 0.04 Archaeplastida
Pp3c2_10280V3.1 No alias RAB GTPase homolog A2B 0.04 Archaeplastida
Solyc10g045550.2.1 No alias A-class RAB GTPase 0.05 Archaeplastida
Solyc12g014080.2.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Zm00001e000673_P001 No alias A-class RAB GTPase 0.05 Archaeplastida
Zm00001e011737_P001 No alias A-class RAB GTPase 0.05 Archaeplastida
AMTR_s00021p00189630 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 LandPlants
AT1G06400 ATRABA1A, ARA2,... Ras-related small GTP-binding family protein 0.02 LandPlants
AT4G18800 ATHSGBP, RABA1d,... RAB GTPase homolog A1D 0.02 LandPlants
GSVIVT01021253001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 LandPlants
GSVIVT01023225001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 LandPlants
MA_10434967g0010 No alias A-class RAB GTPase 0.04 LandPlants
MA_129080g0010 No alias A-class RAB GTPase 0.02 LandPlants
Pp3c14_15250V3.1 No alias RAB GTPase homolog A2B 0.02 LandPlants
Pp3c14_15310V3.1 No alias RAB GTPase homolog A2B 0.01 LandPlants
Pp3c1_28210V3.1 No alias RAB GTPase homolog A2B 0.02 LandPlants
Pp3c2_10280V3.1 No alias RAB GTPase homolog A2B 0.03 LandPlants
Smo232291 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 LandPlants
Solyc10g045550.2.1 No alias A-class RAB GTPase 0.05 LandPlants
Solyc12g014080.2.1 No alias A-class RAB GTPase 0.02 LandPlants
Zm00001e011737_P001 No alias A-class RAB GTPase 0.05 LandPlants
AMTR_s00021p00189630 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.03 SeedPlants
AT1G06400 ATRABA1A, ARA2,... Ras-related small GTP-binding family protein 0.02 SeedPlants
AT4G18800 ATHSGBP, RABA1d,... RAB GTPase homolog A1D 0.02 SeedPlants
GSVIVT01021253001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 SeedPlants
GSVIVT01023225001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 SeedPlants
MA_10434967g0010 No alias A-class RAB GTPase 0.04 SeedPlants
MA_129080g0010 No alias A-class RAB GTPase 0.02 SeedPlants
Solyc10g045550.2.1 No alias A-class RAB GTPase 0.03 SeedPlants
Solyc12g014080.2.1 No alias A-class RAB GTPase 0.02 SeedPlants
Zm00001e011737_P001 No alias A-class RAB GTPase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!