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  5. Solyc12g005700.2.1

Solyc12g005700.2.1 (Solyc12g005700)


Aliases : Solyc12g005700

Description : no hits & (original description: none)


Gene families : OG0001346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005700.2.1

Target Alias Description ECC score Gene Family Method Actions
AT1G11500 No alias Protein of unknown function (DUF1218) 0.03 OrthoFinder output from all 47 species
AT2G32280 No alias Protein of unknown function (DUF1218) 0.02 OrthoFinder output from all 47 species
Aev_g37438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26439.t1 Aspi01Gene26439 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41393.t1 Aspi01Gene41393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41397.t1 Aspi01Gene41397 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0057.g034295 No alias not classified & original description: CDS=1-1143 0.03 OrthoFinder output from all 47 species
Dcu_g10693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030648001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_19286 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_34358 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g35800.1 LOC_Os05g35800 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g35810.1 LOC_Os05g35810 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g36110.1 LOC_Os07g36110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_16264g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_279855g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g27498 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e021775_P001 Zm00001e021775 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035182_P001 Zm00001e035182 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR009606 DEAL/Modifying_wall_lignin1/2 58 147
No external refs found!