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  5. Solyc12g005290.2.1

Solyc12g005290.2.1 (Solyc12g005290)


Aliases : Solyc12g005290

Description : protein kinase (SD-1)


Gene families : OG0003003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005290.2.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT1G65800 RK2, ARK2 receptor kinase 2 0.03 OrthoFinder output from all 47 species
AT3G12000 No alias S-locus related protein SLR1, putative (S1) 0.07 OrthoFinder output from all 47 species
AT4G27300 No alias S-locus lectin protein kinase family protein 0.03 OrthoFinder output from all 47 species
AT5G39370 No alias Curculin-like (mannose-binding) lectin family protein 0.09 OrthoFinder output from all 47 species
GSVIVT01005707001 RK3, ARK3 Receptor-like serine/threonine-protein kinase SD1-8... 0.03 OrthoFinder output from all 47 species
GSVIVT01014507001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01014519001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.01 OrthoFinder output from all 47 species
GSVIVT01014529001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 OrthoFinder output from all 47 species
GSVIVT01014534001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 OrthoFinder output from all 47 species
LOC_Os03g35600.1 RK3, ARK3, LOC_Os03g35600 protein kinase (SD-1) 0.02 OrthoFinder output from all 47 species
LOC_Os05g42210.1 RK3, ARK3, LOC_Os05g42210 protein kinase (SD-1) 0.02 OrthoFinder output from all 47 species
Solyc04g077320.2.1 Solyc04g077320 G-type lectin S-receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species
Solyc04g077360.3.1 Solyc04g077360 protein kinase (SD-1) 0.03 OrthoFinder output from all 47 species
Solyc07g063700.2.1 Solyc07g063700 protein kinase (SD-1) 0.06 OrthoFinder output from all 47 species
Solyc07g063720.1.1 Solyc07g063720 protein kinase (SD-1) 0.03 OrthoFinder output from all 47 species
Solyc07g063750.3.1 Solyc07g063750 protein kinase (SD-1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0004674 protein serine/threonine kinase activity IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
BP GO:0048544 recognition of pollen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003609 Pan_app 342 408
IPR000858 S_locus_glycoprot_dom 213 320
IPR021820 S-locus_recpt_kinase_C 784 829
IPR001480 Bulb-type_lectin_dom 74 181
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 516 782
No external refs found!