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  5. Solyc12g005070.2.1

Solyc12g005070.2.1 (Solyc12g005070)


Aliases : Solyc12g005070

Description : CASP-like protein 2D1 OS=Vitis vinifera (sp|a7p0p3|cspl3_vitvi : 216.0)


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005070.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00153320 evm_27.TU.AmTr_v1... CASP-like protein 2B1 OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
AT5G54980 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
Adi_g051298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38464 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18231.t1 Aspi01Gene18231 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18890.t1 Aspi01Gene18890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.02 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.04 OrthoFinder output from all 47 species
Dcu_g45174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os02g12760.1 LOC_Os02g12760 CASP-like protein 2D1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os12g32970.1 LOC_Os12g32970 CASP-like protein 2B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Lfl_g06445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_8167318g0010 No alias CASP-like protein 2BC1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Ore_g30725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20249 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007556 No alias not classified & original description: CDS=113-772 0.02 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014468_P001 Zm00001e014468 CASP-like protein 2D1 OS=Zea mays (sp|b6tuw9|csplc_maize : 245.0) 0.03 OrthoFinder output from all 47 species
Zm00001e030420_P001 Zm00001e030420 CASP-like protein 2C1 OS=Zea mays (sp|b6u769|cspld_maize : 150.0) 0.04 OrthoFinder output from all 47 species
Zm00001e037699_P002 Zm00001e037699 CASP-like protein 2C3 OS=Zea mays (sp|b6sza7|cspla_maize : 180.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 4 141
No external refs found!