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  5. Solyc11g073280.2.1

Solyc11g073280.2.1 (Solyc11g073280)


Aliases : Solyc11g073280

Description : mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP trafficking complex


Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc11g073280.2.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00035940 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
AT5G37720 ALY4 ALWAYS EARLY 4 0.04 OrthoFinder output from all 47 species
Adi_g002341 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Adi_g082290 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Adi_g088997 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Aev_g08597 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Als_g15022 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Als_g31875 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Aob_g01620 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Aop_g07392 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Azfi_s0107.g045108 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Cba_g14245 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Cba_g38766 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.05 OrthoFinder output from all 47 species
Ceric.04G082000.1 Ceric.04G082000 mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Ceric.08G019300.1 Ceric.08G019300 mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Ceric.15G071200.1 Ceric.15G071200 mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Ceric.24G052400.1 Ceric.24G052400 mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.40 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Dde_g27518 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Ehy_g00666 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Ehy_g30549 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
GSVIVT01030785001 ALY4 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Len_g36767 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Lfl_g02048 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Lfl_g10505 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
MA_4147g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Nbi_g05648 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Nbi_g24407 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Pir_g05319 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Pir_g09281 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Pir_g46452 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Pnu_g05870 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.05 OrthoFinder output from all 47 species
Pnu_g16813 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005275 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Sam_g06668 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.03 OrthoFinder output from all 47 species
Sam_g09903 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Sam_g51376 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species
Spa_g32971 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Tin_g13612 No alias mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... 0.02 OrthoFinder output from all 47 species
Zm00001e009369_P001 Zm00001e009369 mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 94 162
IPR025715 FoP_C 187 245
No external refs found!