1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g072800.3.1

Solyc11g072800.3.1 (Solyc11g072800)


Aliases : Solyc11g072800

Description : NADPH-oxidase (Rboh)


Gene families : OG0000372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000372_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072800.3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cba_g11837 RBOHAP108,... respiratory burst NADPH oxidase *(SGN4) & original... 0.02 OrthoFinder output from all 47 species
Solyc08g081690.3.1 RBOHAP108,... NADPH-oxidase (Rboh) 0.05 OrthoFinder output from all 47 species
Tin_g21316 RBOHAP108,... respiratory burst NADPH oxidase *(SGN4) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR013112 FAD-bd_8 389 511
IPR013130 Fe3_Rdtase_TM_dom 195 347
IPR013121 Fe_red_NAD-bd_6 518 676
No external refs found!