LOC_Os03g60390.1

Description : Alfin-like transcription factor

Gene families : OG_01_0000328 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000328_tree ,
OG_02_0000344 (LandPlants) Phylogenetic Tree(s): OG_02_0000344_tree ,
OG_03_0003234 (SeedPlants) Phylogenetic Tree(s): OG_03_0003234_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g60390.1
Cluster	HCCA: Cluster_353

Target	Alias	Description	ECC score	Gene Family Method
Solyc12g096040.3.1	No alias	Alfin-like transcription factor	0.02	Archaeplastida
Zm00001e021294_P001	No alias	Alfin-like transcription factor	0.03	Archaeplastida
Zm00001e035527_P001	No alias	Alfin-like transcription factor	0.03	Archaeplastida
Pp3c1_8820V3.1	No alias	alfin-like 3	0.02	LandPlants
Pp3c7_26020V3.1	No alias	alfin-like 3	0.01	LandPlants
Solyc06g062850.3.1	No alias	Alfin-like transcription factor	0.02	LandPlants
Solyc12g096040.3.1	No alias	Alfin-like transcription factor	0.02	LandPlants
Zm00001e021294_P001	No alias	Alfin-like transcription factor	0.03	LandPlants
Zm00001e022754_P002	No alias	no hits & (original description: none)	0.02	LandPlants
AT5G05610	AL1	alfin-like 1	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021998	Alfin	15	140
IPR019787	Znf_PHD-finger	190	239

External Links

No external refs found!