Aliases : CSB3, CLB4, GCPE, HDS, ISPG, Solyc11g069380
Description : 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Gene families : OG0004404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004404_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc11g069380.2.1 | |
Cluster | HCCA: Cluster_147 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00175p00057810 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g490350 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g01725 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g08921 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g39160.1 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.05 | OrthoFinder output from all 47 species | |
Len_g47442 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
MA_88006g0010 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.04 | OrthoFinder output from all 47 species | |
Mp5g09870.1 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.04 | OrthoFinder output from all 47 species | |
Msp_g01219 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015046_P001 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016114 | terpenoid biosynthetic process | IEA | Interproscan |
MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008037 | cell recognition | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
BP | GO:0048544 | recognition of pollen | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
MF | GO:0070402 | NADPH binding | IEP | HCCA |
MF | GO:0070403 | NAD+ binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004588 | IspG_bac-typ | 87 | 728 |
No external refs found! |