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  5. Solyc11g067230.2.1

Solyc11g067230.2.1 (VPS4, SKD1, ATSKD1,...)


Aliases : VPS4, SKD1, ATSKD1, Solyc11g067230

Description : serine carboxypeptidase. ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex


Gene families : OG0002846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g067230.2.1

Target Alias Description ECC score Gene Family Method Actions
Dac_g11998 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13757 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036166001 VPS4, SKD1, ATSKD1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
LOC_Os01g04814.1 VPS4, SKD1,... ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 OrthoFinder output from all 47 species
Lfl_g27517 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
MA_34399g0010 VPS4, SKD1, ATSKD1 ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 OrthoFinder output from all 47 species
Sam_g37514 No alias EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016954_P004 VPS4, SKD1,... ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR007330 MIT_dom 7 70
IPR015415 Vps4_C 365 429
IPR003959 ATPase_AAA_core 166 295
No external refs found!