Solyc11g063610.3.1 (COX1, Solyc11g063610)

Aliases : COX1, Solyc11g063610

Description : Cytochrome c oxidase subunit 1 OS=Oenothera berteroana (sp|p08743|cox1_oenbe : 402.0)

Gene families : OG0003734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003734_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g063610.3.1
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
ATMG01360	COX1	cytochrome oxidase	0.13	OrthoFinder output from all 47 species
Aev_g13913	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.07	OrthoFinder output from all 47 species
Ala_g26228	COX1	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Ala_g39523	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.05	OrthoFinder output from all 47 species
Als_g03025	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.11	OrthoFinder output from all 47 species
Aob_g06478	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.06	OrthoFinder output from all 47 species
Aop_g15521	COX1	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g25091	COX1	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Ceric.13G041500.1	Ceric.13G041500	not classified & original description: pacid=50636847...	0.09	OrthoFinder output from all 47 species
Ceric.1Z245600.1	COX1, Ceric.1Z245600	not classified & original description: pacid=50638984...	0.1	OrthoFinder output from all 47 species
Ceric.1Z287000.1	COX1, Ceric.1Z287000	not classified & original description: pacid=50577020...	0.1	OrthoFinder output from all 47 species
Ceric.1Z295800.1	COX1, Ceric.1Z295800	not classified & original description: pacid=50613701...	0.1	OrthoFinder output from all 47 species
Ceric.1Z313900.1	COX1, Ceric.1Z313900	not classified & original description: pacid=50567670...	0.1	OrthoFinder output from all 47 species
Dcu_g47926	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.08	OrthoFinder output from all 47 species
Dde_g08450	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.05	OrthoFinder output from all 47 species
GSVIVT01020676001	COX1	Cytochrome c oxidase subunit 1 OS=Glycine max	0.05	OrthoFinder output from all 47 species
Gb_06295	No alias	Cytochrome c oxidase subunit 1 OS=Raphanus sativus...	0.09	OrthoFinder output from all 47 species
Gb_31333	COX1	component COX1 of cytochrome c oxidase complex	0.07	OrthoFinder output from all 47 species
LOC_Os12g33946.1	COX1, LOC_Os12g33946	component COX1 of cytochrome c oxidase complex	0.1	OrthoFinder output from all 47 species
Len_g25342	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.04	OrthoFinder output from all 47 species
Lfl_g32196	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.03	OrthoFinder output from all 47 species
MA_10428650g0020	COX1	component COX1 of cytochrome c oxidase complex	0.03	OrthoFinder output from all 47 species
Msp_g31774	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.03	OrthoFinder output from all 47 species
Nbi_g21852	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.14	OrthoFinder output from all 47 species
Ore_g07659	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.04	OrthoFinder output from all 47 species
Pir_g02721	COX1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c4_28940V3.1	COX1, Pp3c4_28940	cytochrome oxidase	0.02	OrthoFinder output from all 47 species
Pp3c4_28946V3.1	COX1, Pp3c4_28946	cytochrome oxidase	0.02	OrthoFinder output from all 47 species
Ppi_g59291	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026928	COX1	not classified & original description: CDS=1-180	0.02	OrthoFinder output from all 47 species
Sam_g12101	No alias	EC_1.9 oxidoreductase acting on heme group of donor &...	0.11	OrthoFinder output from all 47 species
Spa_g22204	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.1	OrthoFinder output from all 47 species
Tin_g21821	COX1	EC_1.9 oxidoreductase acTing on heme group of donor &...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004129	cytochrome-c oxidase activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009060	aerobic respiration	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	None	Extended
MF	GO:0020037	heme binding	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0045333	cellular respiration	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000883	Cyt_C_Oxase_1	2	260

External Links

No external refs found!

Solyc11g063610.3.1 (COX1, Solyc11g063610)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation