Solyc11g044360.3.1 (pde191, Solyc11g044360)

Aliases : pde191, Solyc11g044360

Description : transcription factor (mTERF)

Gene families : OG0004879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g044360.3.1
Cluster	HCCA: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method
AT4G38160	pde191	Mitochondrial transcription termination factor family protein	0.16	OrthoFinder output from all 47 species
Adi_g016128	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g042075	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g01267	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g02796	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0488.g073506	No alias	mTERF-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.04G021700.1	pde191, Ceric.04G021700	mTERF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.07G027800.1	Ceric.07G027800	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g15007	No alias	mTERF-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Dde_g07526	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01023845001	pde191	RNA biosynthesis.organelle...	0.08	OrthoFinder output from all 47 species
Gb_34004	pde191	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os08g40430.1	pde191, LOC_Os08g40430	transcription factor (mTERF)	0.06	OrthoFinder output from all 47 species
Len_g03697	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g04748	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_453913g0010	pde191	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
Msp_g45891	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g00835	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g31098	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g09424	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12639	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010841	No alias	mTERF-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024452	No alias	mTERF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Spa_g15211	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g42134	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g07914	pde191	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	84	310
IPR003690	MTERF	3	101

External Links

No external refs found!

Solyc11g044360.3.1 (pde191, Solyc11g044360)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation