Solyc11g042930.2.1 (ASK1, ATSKP1, UIP1,...)

Aliases : ASK1, ATSKP1, UIP1, SKP1, SKP1A, Solyc11g042930

Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g042930.2.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G03170	ASK14, SK14	SKP1-like 14	0.03	OrthoFinder output from all 47 species
AT5G42190	ASK2, SKP1B	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	0.03	OrthoFinder output from all 47 species
Len_g57380	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Mp3g00120.1	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.03	OrthoFinder output from all 47 species
Msp_g40582	ASK2, SKP1B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g32738	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Smo271223	ASK2, SKP1B	Protein degradation.peptide tagging.Ubiquitin...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR016073	Skp1_comp_POZ	5	64
IPR016072	Skp1_comp_dimer	106	153

External Links

No external refs found!